Last Updated: 09/26/2026
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Found 10 publications
Panmap: Scalable phylogeny-guided alignment, genotyping, and placement on pangenomes.
Journal: bioRxiv : the preprint server for biology
Published: April 10, 2026
Extensive splicing deficiency in a degenerating mating-type chromosome.
Journal: bioRxiv : the preprint server for biology
Published: December 22, 2025
Splicing deficiency is driven by genomic erosion in non-recombining algal mating-type chromosomes.
Journal: PLoS biology
Published: December 02, 2025
Transposable elements drive intron gain in diverse eukaryotes.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Published: November 23, 2022
Treenome Browser: co-visualization of enormous phylogenies and millions of genomes.
Journal: Bioinformatics (Oxford, England)
Published: September 27, 2022
Online Phylogenetics using Parsimony Produces Slightly Better Trees and is Dramatically More Efficient for Large SARS-CoV-2 Phylogenies than de novo and Maximum-Likelihood Approaches.
Journal: bioRxiv : the preprint server for biology
Published: May 25, 2022
matOptimize: a parallel tree optimization method enables online phylogenetics for SARS-CoV-2.
Journal: Bioinformatics (Oxford, England)
Published: March 06, 2022
Pandemic-scale phylogenetics.
Journal: bioRxiv : the preprint server for biology
Published: December 20, 2021
Online Phylogenetics with matOptimize Produces Equivalent Trees and is Dramatically More Efficient for Large SARS-CoV-2 Phylogenies than de novo and Maximum-Likelihood Implementations.
Journal: Systematic biology
Published: November 29, 2021
A Daily-Updated Database and Tools for Comprehensive SARS-CoV-2 Mutation-Annotated Trees.
Journal: Molecular biology and evolution
Published: September 01, 2021
Showing 1-10 of 10
Last Updated: 09/26/2026