Amin Emad

Montreal, QC, Canada

Last Updated: 09/26/2026

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Found 27 publications

Anticancer Monotherapy and Polytherapy Drug Response Prediction Using Deep Learning: Guidelines and Best Practices.

Anticancer Monotherapy and Polytherapy Drug Response Prediction Using Deep Learning: Guidelines and Best Practices.

Journal: Methods in molecular biology (Clifton, N.J.)

Published: August 08, 2025

Refining sequence-to-expression modelling with chromatin accessibility.

Refining sequence-to-expression modelling with chromatin accessibility.

Journal: Bioinformatics (Oxford, England)

Published: June 25, 2025

Divergent responses to SARS-CoV-2 infection in bronchial epithelium with pre-existing respiratory diseases.

Divergent responses to SARS-CoV-2 infection in bronchial epithelium with pre-existing respiratory diseases.

Journal: iScience

Published: October 08, 2024

Deciphering lineage-relevant gene regulatory networks during endoderm formation by InPheRNo-ChIP.

Deciphering lineage-relevant gene regulatory networks during endoderm formation by InPheRNo-ChIP.

Journal: Briefings in bioinformatics

Published: August 26, 2024

Circulating IL-17F, but not IL-17A, is elevated in severe COVID-19 and leads to an ERK1/2 and p38 MAPK-dependent increase in ICAM-1 cell surface expression and neutrophil adhesion on endothelial cells.

Circulating IL-17F, but not IL-17A, is elevated in severe COVID-19 and leads to an ERK1/2 and p38 MAPK-dependent increase in ICAM-1 cell surface expression and neutrophil adhesion on endothelial cells.

Journal: Frontiers in immunology

Published: June 21, 2024

INTREPPPID-an orthologue-informed quintuplet network for cross-species prediction of protein-protein interaction.

INTREPPPID-an orthologue-informed quintuplet network for cross-species prediction of protein-protein interaction.

Journal: Briefings in bioinformatics

Published: March 02, 2024

Unbiased characterization of COVID-19 endotypes leads to prognostication of high-risk individuals using routine blood tests.

Unbiased characterization of COVID-19 endotypes leads to prognostication of high-risk individuals using routine blood tests.

Journal: Communications medicine

Published: October 27, 2023

GRouNdGAN: GRN-guided simulation of single-cell RNA-seq data using causal generative adversarial networks.

GRouNdGAN: GRN-guided simulation of single-cell RNA-seq data using causal generative adversarial networks.

Journal: Nature communications

Published: July 31, 2023

Validation of ANG-1 and P-SEL as biomarkers of post-COVID-19 conditions using data from the Biobanque québécoise de la COVID-19 (BQC-19).

Validation of ANG-1 and P-SEL as biomarkers of post-COVID-19 conditions using data from the Biobanque québécoise de la COVID-19 (BQC-19).

Journal: Clinical proteomics

Published: April 24, 2023

Analysis of gene expression and use of connectivity mapping to identify drugs for treatment of human glomerulopathies.

Analysis of gene expression and use of connectivity mapping to identify drugs for treatment of human glomerulopathies.

Journal: Frontiers in medicine

Published: December 12, 2022

Interpretable deep learning architectures for improving drug response prediction performance: myth or reality?

Interpretable deep learning architectures for improving drug response prediction performance: myth or reality?

Journal: Bioinformatics (Oxford, England)

Published: October 14, 2022

MARSY: a multitask deep-learning framework for prediction of drug combination synergy scores.

MARSY: a multitask deep-learning framework for prediction of drug combination synergy scores.

Journal: Bioinformatics (Oxford, England)

Published: June 17, 2022

Showing 1-12 of 27

Last Updated: 09/26/2026