Anne Kupczok

Wageningen, GE 6708PB, Netherlands

Last Updated: 09/26/2026

Save publications for later

Sign Up

Not sure about your diagnosis?

Check Your Symptoms

Found 43 publications

Genus-wide Homologous Recombination of Tail Fibers Maintains Tailocin Diversity in Pectobacterium.

Genus-wide Homologous Recombination of Tail Fibers Maintains Tailocin Diversity in Pectobacterium.

Journal: Genome biology and evolution

Published: April 12, 2026

RdRpCATCH: a unified resource for RNA virus discovery using viral RNA-dependent RNA polymerase profile Hidden Markov models.

RdRpCATCH: a unified resource for RNA virus discovery using viral RNA-dependent RNA polymerase profile Hidden Markov models.

Journal: NAR genomics and bioinformatics

Published: February 24, 2026

Phylogenetic support of pebS as a phage-exclusive auxiliary metabolic gene.

Phylogenetic support of pebS as a phage-exclusive auxiliary metabolic gene.

Journal: FEMS microbiology letters

Published: January 28, 2026

Identification and Classification of Expressed Orphan Genes, Spurious Orphan Genes, and Conserved Genes in the Human Gut Microbiome.

Identification and Classification of Expressed Orphan Genes, Spurious Orphan Genes, and Conserved Genes in the Human Gut Microbiome.

Journal: Genome biology and evolution

Published: January 19, 2026

Gene co-occurrence and its association with phage infectivity in bacterial pangenomes.

Gene co-occurrence and its association with phage infectivity in bacterial pangenomes.

Journal: Philosophical transactions of the Royal Society of London. Series B, Biological sciences

Published: September 04, 2025

Machine learning can distinguish orphans that have resulted from sequence divergence beyond recognition.

Machine learning can distinguish orphans that have resulted from sequence divergence beyond recognition.

Journal: Bioinformatics advances

Published: July 09, 2025

Advances and challenges in understanding evolution through genome comparison: meeting report of the European Molecular Biology Organization (EMBO) lecture course "Evolutionary and Comparative Genomics".

Advances and challenges in understanding evolution through genome comparison: meeting report of the European Molecular Biology Organization (EMBO) lecture course "Evolutionary and Comparative Genomics".

Journal: Bioinformatics advances

Published: June 17, 2025

Pangenomics to understand prophage dynamics in the Pectobacterium genus and the radiating lineages of Pectobacterium brasiliense.

Pangenomics to understand prophage dynamics in the Pectobacterium genus and the radiating lineages of Pectobacterium brasiliense.

Journal: Microbial genomics

Published: May 07, 2025

Insights into diversity, host range, and evolution of iflaviruses in Lepidoptera through transcriptome mining.

Insights into diversity, host range, and evolution of iflaviruses in Lepidoptera through transcriptome mining.

Journal: Virus evolution

Published: February 03, 2025

A Non-Metaproteomics Researchers' View on Metaproteomics in Microbiome Research.

A Non-Metaproteomics Researchers' View on Metaproteomics in Microbiome Research.

Journal: Proteomics

Published: January 16, 2025

Large-scale investigation of species-specific orphan genes in the human gut microbiome elucidates their evolutionary origins.

Large-scale investigation of species-specific orphan genes in the human gut microbiome elucidates their evolutionary origins.

Journal: Genome research

Published: January 11, 2024

Identification of Shemin pathway genes for tetrapyrrole biosynthesis in bacteriophage sequences from aquatic environments.

Identification of Shemin pathway genes for tetrapyrrole biosynthesis in bacteriophage sequences from aquatic environments.

Journal: Nature communications

Published: December 21, 2023

Showing 1-12 of 43

Last Updated: 09/26/2026