Bonil Koo

Seoul, Republic of Korea

Last Updated: 09/26/2026

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Found 15 publications

Improving hit discovery by integrating activity cliff sensitivity into active learning.

Improving hit discovery by integrating activity cliff sensitivity into active learning.

Journal: Bioinformatics (Oxford, England)

Published: July 07, 2026

CAREPath: semantic context-aware reasoning paths with mechanism-augmented embeddings for drug repurposing.

CAREPath: semantic context-aware reasoning paths with mechanism-augmented embeddings for drug repurposing.

Journal: Briefings in bioinformatics

Published: June 02, 2026

MixingDTA: improved drug-target affinity prediction by extending mixup with guilt-by-association.

MixingDTA: improved drug-target affinity prediction by extending mixup with guilt-by-association.

Journal: Bioinformatics (Oxford, England)

Published: July 15, 2025

Transcriptome-conditioned molecule generation via gene interaction-aware fragment modeling with a GPT-based architecture.

Transcriptome-conditioned molecule generation via gene interaction-aware fragment modeling with a GPT-based architecture.

Journal: Scientific reports

Published: June 17, 2025

Transcriptome Transformer: improving patient survival prediction via multitask learning of transcriptomic and clinical features.

Transcriptome Transformer: improving patient survival prediction via multitask learning of transcriptomic and clinical features.

Journal: Briefings in bioinformatics

Published: April 20, 2025

PONYTA: prioritization of phenotype-related genes from mouse KO events using PU learning on a biological network.

PONYTA: prioritization of phenotype-related genes from mouse KO events using PU learning on a biological network.

Journal: Bioinformatics (Oxford, England)

Published: July 12, 2024

Transfer learning of condition-specific perturbation in gene interactions improves drug response prediction.

Transfer learning of condition-specific perturbation in gene interactions improves drug response prediction.

Journal: Bioinformatics (Oxford, England)

Published: June 28, 2024

Unraveling the impact of lysosomal dysfunction on myeloproliferative neoplasm.

Unraveling the impact of lysosomal dysfunction on myeloproliferative neoplasm.

Journal: Cancer medicine

Published: April 21, 2024

Increased local DNA methylation disorder in AMLs with DNMT3A-destabilizing variants and its clinical implication.

Increased local DNA methylation disorder in AMLs with DNMT3A-destabilizing variants and its clinical implication.

Journal: Nature communications

Published: June 28, 2023

GOAT: Gene-level biomarker discovery from multi-Omics data using graph ATtention neural network for eosinophilic asthma subtype.

GOAT: Gene-level biomarker discovery from multi-Omics data using graph ATtention neural network for eosinophilic asthma subtype.

Journal: Bioinformatics (Oxford, England)

Published: April 25, 2023

Improved drug response prediction by drug target data integration via network-based profiling.

Improved drug response prediction by drug target data integration via network-based profiling.

Journal: Briefings in bioinformatics

Published: November 19, 2022

Metheor: Ultrafast DNA methylation heterogeneity calculation from bisulfite read alignments.

Metheor: Ultrafast DNA methylation heterogeneity calculation from bisulfite read alignments.

Journal: PLoS computational biology

Published: September 19, 2022

Showing 1-12 of 15

Last Updated: 09/26/2026