Castrense Savojardo

Bologna, Italy

Last Updated: 09/26/2026

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Found 85 publications

On the state of protein function prediction: a report on the fourth CAFA challenge.

On the state of protein function prediction: a report on the fourth CAFA challenge.

Journal: bioRxiv : the preprint server for biology

Published: May 18, 2026

On the state of protein function prediction: a report on the fourth CAFA challenge.

On the state of protein function prediction: a report on the fourth CAFA challenge.

Journal: bioRxiv : the preprint server for biology

Published: May 18, 2026

Acinetobacter enrichment shapes composition and function of the bacterial microbiota of field-grown tomato plants.

Acinetobacter enrichment shapes composition and function of the bacterial microbiota of field-grown tomato plants.

Journal: mSphere

Published: January 15, 2026

Alpha&ESMhFolds: An Updated Web Server for the Comparison, Evaluation, and Annotation of Human AlphaFold2 and ESMFold Models.

Alpha&ESMhFolds: An Updated Web Server for the Comparison, Evaluation, and Annotation of Human AlphaFold2 and ESMFold Models.

Journal: Journal of molecular biology

Published: October 10, 2025

Predicting the Pathogenicity of Human Protein Variants: Not Only a Matter of Residue Labeling.

Predicting the Pathogenicity of Human Protein Variants: Not Only a Matter of Residue Labeling.

Journal: Methods in molecular biology (Clifton, N.J.)

Published: July 02, 2025

The elusive genomic signature of tadpole shrimps' ancient morphology.

The elusive genomic signature of tadpole shrimps' ancient morphology.

Journal: Biology letters

Published: March 10, 2025

A genome-annotated bacterial collection of the plant food system microbiota.

A genome-annotated bacterial collection of the plant food system microbiota.

Journal: Microbiology resource announcements

Published: January 14, 2025

DDGemb: predicting protein stability change upon single- and multi-point variations with embeddings and deep learning.

DDGemb: predicting protein stability change upon single- and multi-point variations with embeddings and deep learning.

Journal: Bioinformatics (Oxford, England)

Published: November 14, 2024

AlphaFold2 and ESMFold: A large-scale pairwise model comparison of human enzymes upon Pfam functional annotation.

AlphaFold2 and ESMFold: A large-scale pairwise model comparison of human enzymes upon Pfam functional annotation.

Journal: Computational and structural biotechnology journal

Published: October 21, 2024

Evaluation of the structural models of the human reference proteome: AlphaFold2 versus ESMFold.

Evaluation of the structural models of the human reference proteome: AlphaFold2 versus ESMFold.

Journal: Current research in structural biology

Published: September 26, 2024

A descriptor-free machine learning framework to improve antigen discovery for bacterial pathogens.

A descriptor-free machine learning framework to improve antigen discovery for bacterial pathogens.

Journal: PloS one

Published: September 23, 2024

Testing the Capability of Embedding-Based Alignments on the GST Superfamily Classification: The Role of Protein Length.

Testing the Capability of Embedding-Based Alignments on the GST Superfamily Classification: The Role of Protein Length.

Journal: Molecules (Basel, Switzerland)

Published: September 06, 2024

Showing 1-12 of 85

Last Updated: 09/26/2026