Cedric Chauve
8888 University Drive, V5A 1S6
Burnaby, BC, Canada
Burnaby, BC, Canada
Last Updated: 09/26/2026
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Found 49 publications
On using clustering statistics for assessing plasmid binning tools accuracy.
Journal: Briefings in bioinformatics
Published: March 24, 2026
Undesignable motifs in structural RNAs and combinatorial consequences.
Journal: Journal of mathematical biology
Published: May 15, 2025
A vector representation for phylogenetic trees.
Journal: Philosophical transactions of the Royal Society of London. Series B, Biological sciences
Published: February 20, 2025
AGO, a Framework for the Reconstruction of Ancestral Syntenies and Gene Orders.
Journal: Methods in molecular biology (Clifton, N.J.)
Published: May 31, 2024
Plaseval: a framework for comparing and evaluating plasmid detection tools.
Journal: BMC bioinformatics
Published: May 16, 2024
plASgraph2: using graph neural networks to detect plasmid contigs from an assembly graph.
Journal: Frontiers in microbiology
Published: July 26, 2023
PlasBin-flow: a flow-based MILP algorithm for plasmid contigs binning.
Journal: Bioinformatics (Oxford, England)
Published: June 30, 2023
TKSM: highly modular, user-customizable, and scalable transcriptomic sequencing long-read simulator.
TKSM: highly modular, user-customizable, and scalable transcriptomic sequencing long-read simulator.
Journal: Bioinformatics (Oxford, England)
Published: June 14, 2023
Freddie: annotation-independent detection and discovery of transcriptomic alternative splicing isoforms using long-read sequencing.
Journal: Nucleic acids research
Published: July 19, 2022
Small parsimony for natural genomes in the DCJ-indel model.
Journal: Journal of bioinformatics and computational biology
Published: November 22, 2021
Genion, an accurate tool to detect gene fusion from long transcriptomics reads.
Journal: BMC genomics
Published: September 04, 2021
Last Updated: 09/26/2026