Charles N. Agoti

Kilifi, Kenya

Last Updated: 09/26/2026

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Found 111 publications

Near-complete genomes from six human coronavirus HKU1-positive samples recovered by metagenomics in coastal Kenya, 2024-2025.

Near-complete genomes from six human coronavirus HKU1-positive samples recovered by metagenomics in coastal Kenya, 2024-2025.

Journal: Microbiology resource announcements
Published: August 06, 2026

Eight coding-complete genomes of human metapneumovirus recovered by virus metagenomics in coastal Kenya, 2021-2024.

Eight coding-complete genomes of human metapneumovirus recovered by virus metagenomics in coastal Kenya, 2021-2024.

Journal: Microbiology resource announcements
Published: March 16, 2026

In-hospital and post-discharge mortality among infants with respiratory syncytial virus in rural Kenya: a 25-year retrospective cohort study.

In-hospital and post-discharge mortality among infants with respiratory syncytial virus in rural Kenya: a 25-year retrospective cohort study.

Journal: The Lancet. Global health
Published: October 24, 2025

Cholera in Kenya: A scoping review of current research, evidence gaps and future directions.

Cholera in Kenya: A scoping review of current research, evidence gaps and future directions.

Journal: PLOS global public health
Published: October 06, 2025

Nasopharyngeal Microbiome Composition and its Clinical Correlates in Children Hospitalized with Severe Pneumonia in East Africa.

Nasopharyngeal Microbiome Composition and its Clinical Correlates in Children Hospitalized with Severe Pneumonia in East Africa.

Journal: The Journal of infectious diseases
Published: September 23, 2025

Coxsackievirus A24 variant whole genome sequencing from clinical samples using a three overlapping amplicons strategy.

Coxsackievirus A24 variant whole genome sequencing from clinical samples using a three overlapping amplicons strategy.

Journal: Wellcome open research
Published: September 11, 2025

Cryptosporidium parvum virus 1 genome sequences from pediatric diarrhea cases in coastal Kenya.

Cryptosporidium parvum virus 1 genome sequences from pediatric diarrhea cases in coastal Kenya.

Journal: Microbiology resource announcements
Published: September 04, 2025

Longitudinal Epidemiology and Variant Dynamics of SARS-CoV-2 in Coastal Kenya (2020-2025): Clinical Features and Wave Patterns.

Longitudinal Epidemiology and Variant Dynamics of SARS-CoV-2 in Coastal Kenya (2020-2025): Clinical Features and Wave Patterns.

Journal: Open forum infectious diseases
Published: September 01, 2025

Assessing the Impact of SARS-CoV-2 Spike Mutations on Antibody Binding: A Comparative Assessment of the Wuhan and JN.1 Variants' Full-Length Spikes in a Multiplex Luminex Assay.

Assessing the Impact of SARS-CoV-2 Spike Mutations on Antibody Binding: A Comparative Assessment of the Wuhan and JN.1 Variants' Full-Length Spikes in a Multiplex Luminex Assay.

Journal: Viruses
Published: July 30, 2025

Viral diversity influences T-cell responses to enteric human adenoviruses F40 and F41.

Viral diversity influences T-cell responses to enteric human adenoviruses F40 and F41.

Journal: Virus evolution
Published: June 18, 2025

The genome sequence of varicella-zoster virus (Varicellovirus humanalpha3) obtained by metagenomics from a patient presenting with an exanthem rash.

The genome sequence of varicella-zoster virus (Varicellovirus humanalpha3) obtained by metagenomics from a patient presenting with an exanthem rash.

Journal: Microbiology resource announcements
Published: June 10, 2025

Epidemiological dynamics of influenza B virus across multiple seasons in Kenya and Uganda inferred from sequence data, 2010-2021.

Epidemiological dynamics of influenza B virus across multiple seasons in Kenya and Uganda inferred from sequence data, 2010-2021.

Journal: BMC infectious diseases
Published: May 14, 2025
Showing 1-12 of 111

Last Updated: 09/26/2026