Chuan-le Z. Xiao

State Key Laboratory Of Ophthalmology, Guangdong Provincial Key Laboratory Of Ophthalmology And Visual Science
Guangzhou, China

Last Updated: 09/26/2026

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Found 39 publications

Bream: an open-source deep learning framework for simultaneous base calling and DNA methylation detection on novel nanopore sequencing platforms.

Bream: an open-source deep learning framework for simultaneous base calling and DNA methylation detection on novel nanopore sequencing platforms.

Journal: Frontiers in genetics

Published: November 10, 2025

Generating coherent, ultrashort, and ultraintense Langmuir wave trains via two-plasmon decay instability.

Generating coherent, ultrashort, and ultraintense Langmuir wave trains via two-plasmon decay instability.

Journal: Physical review. E

Published: July 03, 2025

Z-Calling: a tool for A/Z (2,6-diaminopurine) base calling and dZ-DNA detection using PacBio HiFi reads.

Z-Calling: a tool for A/Z (2,6-diaminopurine) base calling and dZ-DNA detection using PacBio HiFi reads.

Journal: Communications biology

Published: June 03, 2025

Single-molecule chromatin profiling reveals cell type-specific A/B compartment alteration and multi-enhancer transcriptional coordination.

Single-molecule chromatin profiling reveals cell type-specific A/B compartment alteration and multi-enhancer transcriptional coordination.

Journal: Journal of genetics and genomics = Yi chuan xue bao

Published: May 23, 2025

Author Correction: Reconstruction of diploid higher-order human 3D genome interactions from noisy Pore-C data using Dip3D.

Author Correction: Reconstruction of diploid higher-order human 3D genome interactions from noisy Pore-C data using Dip3D.

Journal: Nature structural & molecular biology

Published: April 28, 2025

High-throughput capture of actively transcribed region-interacting sequences reveals an intricate promoter-centered regulatory network.

High-throughput capture of actively transcribed region-interacting sequences reveals an intricate promoter-centered regulatory network.

Journal: Molecular cell

Published: February 19, 2025

Accurate cross-species 5mC detection for Oxford Nanopore sequencing in plants with DeepPlant.

Accurate cross-species 5mC detection for Oxford Nanopore sequencing in plants with DeepPlant.

Journal: Nature communications

Published: October 15, 2024

DeepBAM: a high-accuracy single-molecule CpG methylation detection tool for Oxford nanopore sequencing.

DeepBAM: a high-accuracy single-molecule CpG methylation detection tool for Oxford nanopore sequencing.

Journal: Briefings in bioinformatics

Published: February 21, 2024

De novo diploid genome assembly using long noisy reads.

De novo diploid genome assembly using long noisy reads.

Journal: Nature communications

Published: January 04, 2024

Reconstruction of diploid higher-order human 3D genome interactions from noisy Pore-C data using Dip3D.

Reconstruction of diploid higher-order human 3D genome interactions from noisy Pore-C data using Dip3D.

Journal: Nature structural & molecular biology

Published: November 06, 2023

A high heterozygosity genome assembly of Aedes albopictus enables the discovery of the association of PGANT3 with blood-feeding behavior.

A high heterozygosity genome assembly of Aedes albopictus enables the discovery of the association of PGANT3 with blood-feeding behavior.

Journal: BMC genomics

Published: September 01, 2023

NextDenovo: an efficient error correction and accurate assembly tool for noisy long reads.

NextDenovo: an efficient error correction and accurate assembly tool for noisy long reads.

Journal: Genome biology

Published: June 12, 2023

Showing 1-12 of 39

Last Updated: 09/26/2026