Dick J. De Ridder
Wageningen, GE 6708PB, Netherlands
Last Updated: 09/26/2026
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Found 118 publications
Genus-wide Homologous Recombination of Tail Fibers Maintains Tailocin Diversity in Pectobacterium.
Journal: Genome biology and evolution
Published: April 12, 2026
RdRpCATCH: a unified resource for RNA virus discovery using viral RNA-dependent RNA polymerase profile Hidden Markov models.
Journal: NAR genomics and bioinformatics
Published: February 24, 2026
Identification and Classification of Expressed Orphan Genes, Spurious Orphan Genes, and Conserved Genes in the Human Gut Microbiome.
Journal: Genome biology and evolution
Published: January 19, 2026
MoGAAAP: a modular Snakemake workflow for automated genome assembly and annotation with quality assessment.
Journal: NAR genomics and bioinformatics
Published: September 02, 2025
A generic pipeline for CADD score generation: chickenCADD and turkeyCADD.
Journal: G3 (Bethesda, Md.)
Published: June 23, 2025
Three Novel Genomes Broaden the Wild Side of the Capsicum Pangenome.
Journal: Plant direct
Published: June 06, 2025
Pangenomics to understand prophage dynamics in the Pectobacterium genus and the radiating lineages of Pectobacterium brasiliense.
Journal: Microbial genomics
Published: May 07, 2025
BADDADAN: Mechanistic modelling of time-series gene module expression.
Journal: Quantitative plant biology
Published: February 17, 2025
Predicting precursors of plant specialized metabolites using DeepMol automated machine learning.
Journal: Journal of integrative bioinformatics
Published: October 18, 2024
Comparative Assessment of Protein Large Language Models for Enzyme Commission Number Prediction.
Journal: BMC bioinformatics
Published: September 02, 2024
Lactuca super-pangenome reduces bias towards reference genes in lettuce research.
Journal: BMC plant biology
Published: July 01, 2024
Last Updated: 09/26/2026