Emma B. Hodcroft

Lausanne, VD, Switzerland

Last Updated: 09/26/2026

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Found 59 publications

Nextstrain automates real-time phylodynamic analysis of open data for endemic and emerging pathogens.

Nextstrain automates real-time phylodynamic analysis of open data for endemic and emerging pathogens.

Journal: bioRxiv : the preprint server for biology

Published: April 03, 2026

Nextstrain automates real-time phylodynamic analysis of open data for endemic and emerging pathogens.

Nextstrain automates real-time phylodynamic analysis of open data for endemic and emerging pathogens.

Journal: bioRxiv : the preprint server for biology

Published: April 03, 2026

Conference report: The second Bacterial Genome Sequencing Pan-European Network conference.

Conference report: The second Bacterial Genome Sequencing Pan-European Network conference.

Journal: Microbes and infection

Published: July 19, 2025

Evolving infectious disease dynamics shape school-based intervention effectiveness.

Evolving infectious disease dynamics shape school-based intervention effectiveness.

Journal: Nature communications

Published: December 09, 2024

Early unrecognised SARS-CoV-2 introductions shaped the first pandemic wave, Sweden, 2020.

Early unrecognised SARS-CoV-2 introductions shaped the first pandemic wave, Sweden, 2020.

Journal: Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin

Published: October 11, 2024

Conference report: the first bacterial genome sequencing pan-European network conference.

Conference report: the first bacterial genome sequencing pan-European network conference.

Journal: Microbes and infection

Published: August 09, 2024

Estimating Re and overdispersion in secondary cases from the size of identical sequence clusters of SARS-CoV-2.

Estimating Re and overdispersion in secondary cases from the size of identical sequence clusters of SARS-CoV-2.

Journal: PLoS computational biology

Published: May 23, 2024

An updated framework for SARS-CoV-2 variants reflects the unpredictability of viral evolution.

An updated framework for SARS-CoV-2 variants reflects the unpredictability of viral evolution.

Journal: Nature medicine

Published: May 08, 2024

Epidemiological and Clinical Insights into the Enterovirus D68 Upsurge in Europe 2021-2022 and Emergence of Novel B3-Derived Lineages, ENPEN Multicentre Study.

Epidemiological and Clinical Insights into the Enterovirus D68 Upsurge in Europe 2021-2022 and Emergence of Novel B3-Derived Lineages, ENPEN Multicentre Study.

Journal: The Journal of infectious diseases

Published: June 07, 2023

Functional SARS-CoV-2 cross-reactive CD4+ T cells established in early childhood decline with age.

Functional SARS-CoV-2 cross-reactive CD4+ T cells established in early childhood decline with age.

Journal: Proceedings of the National Academy of Sciences of the United States of America

Published: March 14, 2023

Importation of Alpha and Delta variants during the SARS-CoV-2 epidemic in Switzerland: Phylogenetic analysis and intervention scenarios.

Importation of Alpha and Delta variants during the SARS-CoV-2 epidemic in Switzerland: Phylogenetic analysis and intervention scenarios.

Journal: PLoS pathogens

Published: February 28, 2023

Swiss public health measures associated with reduced SARS-CoV-2 transmission using genome data.

Swiss public health measures associated with reduced SARS-CoV-2 transmission using genome data.

Journal: Science translational medicine

Published: November 08, 2022

Showing 1-12 of 59

Last Updated: 09/26/2026