Emmanuel Barillot
Paris, 75005, France
Last Updated: 09/26/2026
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Found 124 publications
AstroLogics: A simulation-based framework for the analysis of Boolean model ensembles.
Journal: Bioinformatics (Oxford, England)
Published: January 09, 2026
Mesenchymal to epithelial transition (MET) in cancer progression: insights from logical modeling.
Journal: Scientific reports
Published: December 17, 2025
Author Correction: Systems medicine disease maps: community-driven comprehensive representation of disease mechanisms.
Journal: NPJ systems biology and applications
Published: July 12, 2025
Cell-type deconvolution methods for spatial transcriptomics.
Journal: Nature reviews. Genetics
Published: April 14, 2025
sCellST predicts single-cell gene expression from H& E images.
Journal: Nature communications
Published: November 17, 2024
NeKo: A tool for automatic network construction from prior knowledge.
Journal: PLoS computational biology
Published: November 06, 2024
Building multiscale models with PhysiBoSS, an agent-based modeling tool.
Journal: ArXiv
Published: July 09, 2024
Building multiscale models with PhysiBoSS, an agent-based modeling tool.
Journal: Briefings in bioinformatics
Published: June 20, 2024
Maboss for HPC environments: implementations of the continuous time Boolean model simulator for large CPU clusters and GPU accelerators.
Journal: BMC bioinformatics
Published: March 22, 2024
Identification of Interpretable Clusters and Associated Signatures in Breast Cancer Single-Cell Data: A Topic Modeling Approach.
Journal: Cancers
Published: February 22, 2024
Integration of clinical, pathological, radiological, and transcriptomic data improves prediction for first-line immunotherapy outcome in metastatic non-small cell lung cancer.
Journal: Nature communications
Published: February 09, 2024
Last Updated: 09/26/2026