Etienne Ruppe

Paris, France

Last Updated: 09/26/2026

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Found 111 publications

Emergence, evolution and spread of antibiotic resistance

Emergence, evolution and spread of antibiotic resistance

Journal: Medecine sciences : M/S

Published: March 20, 2026

10th International Conference on Clinical Metagenomics (ICCMg10): meeting report.

10th International Conference on Clinical Metagenomics (ICCMg10): meeting report.

Journal: Trends in microbiology

Published: March 17, 2026

Pre-existing β-lactamase gene diversity is associated with lower risk of ESBL-producing Enterobacterales colonization in patients exposed to ceftriaxone.

Pre-existing β-lactamase gene diversity is associated with lower risk of ESBL-producing Enterobacterales colonization in patients exposed to ceftriaxone.

Journal: Gut microbes

Published: February 10, 2026

The role of whole genome sequencing in antimicrobial susceptibility prediction of bacteria: 2025 update from the European Committee on Antimicrobial Susceptibility Testing Subcommittee.

The role of whole genome sequencing in antimicrobial susceptibility prediction of bacteria: 2025 update from the European Committee on Antimicrobial Susceptibility Testing Subcommittee.

Journal: Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases

Published: December 12, 2025

Beta-lactamases in anaerobic, intestinal bacteria: a narrative review.

Beta-lactamases in anaerobic, intestinal bacteria: a narrative review.

Journal: Anaerobe

Published: November 13, 2025

Cefiderocol resistance genes identified in environmental samples using functional metagenomics.

Cefiderocol resistance genes identified in environmental samples using functional metagenomics.

Journal: The ISME journal

Published: August 25, 2025

Genome contamination may lead to an overestimation of horizontal gene transfer inferences.

Genome contamination may lead to an overestimation of horizontal gene transfer inferences.

Journal: Nature communications

Published: April 07, 2025

9th International Conference on Clinical Metagenomics (ICCMg9): meeting report.

9th International Conference on Clinical Metagenomics (ICCMg9): meeting report.

Journal: Trends in microbiology

Published: February 20, 2025

Assessing FilmArray Pneumonia+ panel dynamics during antibiotic treatment to predict clinical success in ICU patients with ventilated hospital-acquired pneumonia and ventilator-associated pneumonia: a multicenter prospective study.

Assessing FilmArray Pneumonia+ panel dynamics during antibiotic treatment to predict clinical success in ICU patients with ventilated hospital-acquired pneumonia and ventilator-associated pneumonia: a multicenter prospective study.

Journal: Critical care (London, England)

Published: February 03, 2025

A modelling framework to characterize the impact of antibiotics on the gut microbiota diversity.

A modelling framework to characterize the impact of antibiotics on the gut microbiota diversity.

Journal: Gut microbes

Published: December 23, 2024

Comparison of clinical metagenomics with 16S rDNA Sanger sequencing for the bacteriological diagnosis of culture-negative samples.

Comparison of clinical metagenomics with 16S rDNA Sanger sequencing for the bacteriological diagnosis of culture-negative samples.

Journal: International journal of medical microbiology : IJMM

Published: November 12, 2024

Inter-phylum circulation of a beta-lactamase-encoding gene: a rare but observable event.

Inter-phylum circulation of a beta-lactamase-encoding gene: a rare but observable event.

Journal: Antimicrobial agents and chemotherapy

Published: March 05, 2024

Showing 1-12 of 111

Last Updated: 09/26/2026