Fan Nie
Changsha, 410083, China
Last Updated: 09/26/2026
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Found 11 publications
NanoFilter: enhancing phasing performance by utilizing highly consistent INDELs and SNVs in nanopore sequencing.
Journal: Bioinformatics (Oxford, England)
Published: December 01, 2024
PISAD: reference-free intraspecies sample anomalies detection tool based on k-mer counting.
Journal: GigaScience
Published: November 13, 2024
Phasing nanopore genome assembly by integrating heterozygous variations and Hi-C data.
Journal: Bioinformatics (Oxford, England)
Published: May 22, 2024
De novo diploid genome assembly using long noisy reads.
Journal: Nature communications
Published: January 04, 2024
DNA 5-methylcytosine detection and methylation phasing using PacBio circular consensus sequencing.
Journal: Nature communications
Published: November 20, 2022
NanoSNP: a progressive and haplotype-aware SNP caller on low-coverage nanopore sequencing data.
Journal: Bioinformatics (Oxford, England)
Published: June 13, 2022
Fec: a fast error correction method based on two-rounds overlapping and caching.
Journal: Bioinformatics (Oxford, England)
Published: January 07, 2022
Semi-automated assembly of high-quality diploid human reference genomes.
Journal: Nature
Published: December 29, 2021
Genome-wide detection of cytosine methylations in plant from Nanopore data using deep learning.
Journal: Nature communications
Published: March 10, 2021
NeuralPolish: a novel Nanopore polishing method based on alignment matrix construction and orthogonal Bi-GRU Networks.
Journal: Bioinformatics (Oxford, England)
Published: February 15, 2021
Efficient assembly of nanopore reads via highly accurate and intact error correction.
Journal: Nature communications
Published: February 25, 2020
Showing 1-11 of 11
Last Updated: 09/26/2026