Guillaume J. Filion

Barcelona, CT, Spain

Last Updated: 09/26/2026

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Found 31 publications

CodonTransformer: a multispecies codon optimizer using context-aware neural networks.

CodonTransformer: a multispecies codon optimizer using context-aware neural networks.

Journal: Nature communications

Published: September 16, 2024

Causality in transcription and genome folding: Insights from X inactivation.

Causality in transcription and genome folding: Insights from X inactivation.

Journal: BioEssays : news and reviews in molecular, cellular and developmental biology

Published: June 01, 2022

Chromatin and viral integration in immunity: The challenge of silencing non-self genes.

Chromatin and viral integration in immunity: The challenge of silencing non-self genes.

Journal: Trends in immunology

Published: March 24, 2022

Heterochromatin: did H3K9 methylation evolve to tame transposons?

Heterochromatin: did H3K9 methylation evolve to tame transposons?

Journal: Genome biology

Published: December 03, 2021

Author Correction: Spatially clustered loci with multiple enhancers are frequent targets of HIV-1 integration.

Author Correction: Spatially clustered loci with multiple enhancers are frequent targets of HIV-1 integration.

Journal: Nature communications

Published: October 29, 2021

Chromosome compartments on the inactive X guide TAD formation independently of transcription during X-reactivation.

Chromosome compartments on the inactive X guide TAD formation independently of transcription during X-reactivation.

Journal: Nature communications

Published: August 27, 2020

The chromatin landscape at the HIV-1 provirus integration site determines viral expression.

The chromatin landscape at the HIV-1 provirus integration site determines viral expression.

Journal: Nucleic acids research

Published: May 10, 2020

Strand asymmetry influences mismatch resolution during a single-strand annealing.

Strand asymmetry influences mismatch resolution during a single-strand annealing.

Journal: Genome biology

Published: December 03, 2019

Calibrating Seed-Based Heuristics to Map Short Reads With Sesame.

Calibrating Seed-Based Heuristics to Map Short Reads With Sesame.

Journal: Frontiers in genetics

Published: November 11, 2019

Transcription factors and 3D genome conformation in cell-fate decisions.

Transcription factors and 3D genome conformation in cell-fate decisions.

Journal: Nature

Published: October 15, 2018

An experimental assay of the interactions of amino acids from orthologous sequences shaping a complex fitness landscape.

An experimental assay of the interactions of amino acids from orthologous sequences shaping a complex fitness landscape.

Journal: PLoS genetics

Published: August 21, 2018

Using Barcoded HIV Ensembles (B-HIVE) for Single Provirus Transcriptomics.

Using Barcoded HIV Ensembles (B-HIVE) for Single Provirus Transcriptomics.

Journal: Current protocols in molecular biology

Published: June 01, 2018

Showing 1-12 of 31

Last Updated: 09/26/2026