Jakob N. Nissen

Copenhagen, 2200, Denmark

Last Updated: 09/26/2026

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Found 14 publications

CoverM: read alignment statistics for metagenomics.

CoverM: read alignment statistics for metagenomics.

Journal: Bioinformatics (Oxford, England)

Published: January 23, 2025

Exploring genetic signatures of zoonotic influenza A virus at the swine-human interface with phylogenetic and ancestral sequence reconstruction.

Exploring genetic signatures of zoonotic influenza A virus at the swine-human interface with phylogenetic and ancestral sequence reconstruction.

Journal: Virus evolution

Published: October 26, 2024

Evolutionary dynamics and molecular epidemiology of H1N1 pandemic 2009 influenza A viruses across swine farms in Denmark.

Evolutionary dynamics and molecular epidemiology of H1N1 pandemic 2009 influenza A viruses across swine farms in Denmark.

Journal: Virus evolution

Published: September 30, 2024

Adversarial and variational autoencoders improve metagenomic binning.

Adversarial and variational autoencoders improve metagenomic binning.

Journal: Communications biology

Published: July 06, 2023

Author Correction: Discovery of drug-omics associations in type 2 diabetes with generative deep-learning models.

Author Correction: Discovery of drug-omics associations in type 2 diabetes with generative deep-learning models.

Journal: Nature biotechnology

Published: May 02, 2023

Experimental infection of pigs and ferrets with "pre-pandemic," human-adapted, and swine-adapted variants of the H1N1pdm09 influenza A virus reveals significant differences in viral dynamics and pathological manifestations.

Experimental infection of pigs and ferrets with "pre-pandemic," human-adapted, and swine-adapted variants of the H1N1pdm09 influenza A virus reveals significant differences in viral dynamics and pathological manifestations.

Journal: PLoS pathogens

Published: April 18, 2023

Severe Human Case of Zoonotic Infection with Swine-Origin Influenza A Virus, Denmark, 2021.

Severe Human Case of Zoonotic Infection with Swine-Origin Influenza A Virus, Denmark, 2021.

Journal: Emerging infectious diseases

Published: November 23, 2022

Discovery of drug-omics associations in type 2 diabetes with generative deep-learning models.

Discovery of drug-omics associations in type 2 diabetes with generative deep-learning models.

Journal: Nature biotechnology

Published: March 15, 2022

Reassortant Influenza A(H1N1)pdm09 Virus in Elderly Woman, Denmark, January 2021.

Reassortant Influenza A(H1N1)pdm09 Virus in Elderly Woman, Denmark, January 2021.

Journal: Emerging infectious diseases

Published: November 22, 2021

Genome binning of viral entities from bulk metagenomics data.

Genome binning of viral entities from bulk metagenomics data.

Journal: Nature communications

Published: August 06, 2021

Novel Clade 2.3.4.4b Highly Pathogenic Avian Influenza A H5N8 and H5N5 Viruses in Denmark, 2020.

Novel Clade 2.3.4.4b Highly Pathogenic Avian Influenza A H5N8 and H5N5 Viruses in Denmark, 2020.

Journal: Viruses

Published: April 19, 2021

Improved metagenome binning and assembly using deep variational autoencoders.

Improved metagenome binning and assembly using deep variational autoencoders.

Journal: Nature biotechnology

Published: December 06, 2019

Showing 1-12 of 14

Last Updated: 09/26/2026