K A. Feenstra
Amsterdam, NH 1081HV, Netherlands
Last Updated: 09/26/2026
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Found 31 publications
PIPENN-EMB ensemble net and protein embeddings generalise protein interface prediction beyond homology.
Journal: Scientific reports
Published: October 31, 2024
Mining literature and pathway data to explore the relations of ketamine with neurotransmitters and gut microbiota using a knowledge-graph.
Journal: Bioinformatics (Oxford, England)
Published: April 16, 2023
Ten quick tips for sequence-based prediction of protein properties using machine learning.
Journal: PLoS computational biology
Published: December 01, 2022
Towards a knowledge graph for pre-/probiotics and microbiota-gut-brain axis diseases.
Journal: Scientific reports
Published: May 23, 2022
Multi-task learning to leverage partially annotated data for PPI interface prediction.
Journal: Scientific reports
Published: January 17, 2022
ProteinGLUE multi-task benchmark suite for self-supervised protein modeling.
Journal: Scientific reports
Published: December 17, 2021
PIPENN: protein interface prediction from sequence with an ensemble of neural nets.
Journal: Bioinformatics (Oxford, England)
Published: September 03, 2021
Online biophysical predictions for SARS-CoV-2 proteins.
Journal: BMC molecular and cell biology
Published: January 07, 2021
SeRenDIP-CE: sequence-based interface prediction for conformational epitopes.
Journal: Bioinformatics (Oxford, England)
Published: November 19, 2020
Predicting the relationships between gut microbiota and mental disorders with knowledge graphs.
Journal: Health information science and systems
Published: August 24, 2020
Last Updated: 09/26/2026