Luis Rueda

401 Sunset Ave
Windsor, ON, Canada

Last Updated: 09/26/2026

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Found 24 publications

MolPACL: Molecular Property Prediction Based on Prompt Augmentation and Contrastive Learning.

MolPACL: Molecular Property Prediction Based on Prompt Augmentation and Contrastive Learning.

Journal: IEEE transactions on computational biology and bioinformatics

Published: August 12, 2026

A survey of contrastive learning methods in molecular representation.

A survey of contrastive learning methods in molecular representation.

Journal: Briefings in bioinformatics

Published: July 21, 2025

PPISHES-an enhanced physicochemical approach for predicting protein interaction sites using graph neural networks.

PPISHES-an enhanced physicochemical approach for predicting protein interaction sites using graph neural networks.

Journal: Protein science : a publication of the Protein Society

Published: April 17, 2025

SEGCECO: Subgraph Embedding of Gene expression matrix for prediction of CEll-cell COmmunication.

SEGCECO: Subgraph Embedding of Gene expression matrix for prediction of CEll-cell COmmunication.

Journal: Briefings in bioinformatics

Published: November 07, 2023

PPPCT: Privacy-Preserving framework for Parallel Clustering Transcriptomics data.

PPPCT: Privacy-Preserving framework for Parallel Clustering Transcriptomics data.

Journal: Computers in biology and medicine

Published: August 28, 2023

A Fecal-Microbial-Extracellular-Vesicles-Based Metabolomics Machine Learning Framework and Biomarker Discovery for Predicting Colorectal Cancer Patients.

A Fecal-Microbial-Extracellular-Vesicles-Based Metabolomics Machine Learning Framework and Biomarker Discovery for Predicting Colorectal Cancer Patients.

Journal: Metabolites

Published: March 27, 2023

Cell Type Annotation Model Selection: General-Purpose vs. Pattern-Aware Feature Gene Selection in Single-Cell RNA-Seq Data.

Cell Type Annotation Model Selection: General-Purpose vs. Pattern-Aware Feature Gene Selection in Single-Cell RNA-Seq Data.

Journal: Genes

Published: December 21, 2022

Identification of Enriched Regions in ChIP-Seq Data via a Linear-Time Multi-Level Thresholding Algorithm.

Identification of Enriched Regions in ChIP-Seq Data via a Linear-Time Multi-Level Thresholding Algorithm.

Journal: IEEE/ACM transactions on computational biology and bioinformatics

Published: August 16, 2021

Computationally repurposing drugs for breast cancer subtypes using a network-based approach.

Computationally repurposing drugs for breast cancer subtypes using a network-based approach.

Journal: BMC bioinformatics

Published: June 25, 2021

Discovering cell types using manifold learning and enhanced visualization of single-cell RNA-Seq data.

Discovering cell types using manifold learning and enhanced visualization of single-cell RNA-Seq data.

Journal: Scientific reports

Published: April 15, 2021

The Circadian Clock Gene, Bmal1, Regulates Intestinal Stem Cell Signaling and Represses Tumor Initiation.

The Circadian Clock Gene, Bmal1, Regulates Intestinal Stem Cell Signaling and Represses Tumor Initiation.

Journal: Cellular and molecular gastroenterology and hepatology

Published: April 06, 2021

Prediction of tumor location in prostate cancer tissue using a machine learning system on gene expression data.

Prediction of tumor location in prostate cancer tissue using a machine learning system on gene expression data.

Journal: BMC bioinformatics

Published: March 14, 2020

Showing 1-12 of 24

Last Updated: 09/26/2026