Lukas Heumos
Munich, BY, Germany
Last Updated: 09/26/2026
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Found 15 publications
BioContextAI is a community hub for agentic biomedical systems.
Journal: Nature biotechnology
Published: November 06, 2025
Pertpy: an end-to-end framework for perturbation analysis.
Journal: Nature methods
Published: August 04, 2024
Cluster-efficient pangenome graph construction with nf-core/pangenome.
Journal: Bioinformatics (Oxford, England)
Published: May 14, 2024
OpenMS 3 enables reproducible analysis of large-scale mass spectrometry data.
Journal: Nature methods
Published: February 17, 2024
An open-source framework for end-to-end analysis of electronic health record data.
Journal: Nature medicine
Published: December 11, 2023
Ex vivo tissue perturbations coupled to single-cell RNA-seq reveal multilineage cell circuit dynamics in human lung fibrogenesis.
Journal: Science translational medicine
Published: December 06, 2023
hadge: a comprehensive pipeline for donor deconvolution in single-cell studies.
Journal: Genome biology
Published: August 08, 2023
The scverse project provides a computational ecosystem for single-cell omics data analysis.
Journal: Nature biotechnology
Published: April 10, 2023
Panpipes: a pipeline for multiomic single-cell and spatial transcriptomic data analysis.
Journal: Genome biology
Published: March 14, 2023
Best practices for single-cell analysis across modalities.
Journal: Nature reviews. Genetics
Published: February 14, 2023
mlf-core: a framework for deterministic machine learning.
Journal: Bioinformatics (Oxford, England)
Published: August 10, 2022
Probe set selection for targeted spatial transcriptomics.
Journal: Nature methods
Published: July 19, 2022
Last Updated: 09/26/2026