Mark Achtman
Lee Road
Cork, M, Ireland
Cork, M, Ireland
Last Updated: 09/26/2026
Save publications for later
Sign Up
Not sure about your diagnosis?
Check Your Symptoms
Found 40 publications
Genomic population structures of microbial pathogens.
Journal: Philosophical transactions of the Royal Society of London. Series B, Biological sciences
Published: August 22, 2022
EnteroBase: hierarchical clustering of 100 000s of bacterial genomes into species/subspecies and populations.
Journal: Philosophical transactions of the Royal Society of London. Series B, Biological sciences
Published: August 22, 2022
Helicobacter pylori's historical journey through Siberia and the Americas.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Published: June 23, 2021
Genomic population structure associated with repeated escape of Salmonella enterica ATCC14028s from the laboratory into nature.
Journal: PLoS genetics
Published: April 02, 2021
Genomic diversity of Salmonella enterica -The UoWUCC 10K genomes project.
Journal: Wellcome open research
Published: January 25, 2021
Correction: Multilocus Sequence Typing as a Replacement for Serotyping in Salmonella enterica.
Journal: PLoS pathogens
Published: October 21, 2020
Metagenomics of the modern and historical human oral microbiome with phylogenetic studies on Streptococcus mutans and Streptococcus sobrinus.
Journal: Philosophical transactions of the Royal Society of London. Series B, Biological sciences
Published: October 05, 2020
HierCC: a multi-level clustering scheme for population assignments based on core genome MLST.
Journal: Bioinformatics (Oxford, England)
Published: July 30, 2020
A publicly accessible database for Clostridioides difficile genome sequences supports tracing of transmission chains and epidemics.
Journal: Microbial genomics
Published: July 30, 2020
BlastFrost: fast querying of 100,000s of bacterial genomes in Bifrost graphs.
Journal: Genome biology
Published: February 10, 2020
Accurate reconstruction of bacterial pan- and core genomes with PEPPAN.
Journal: Genome research
Published: January 20, 2020
Emergence of human-adapted Salmonella enterica is linked to the Neolithization process.
Journal: Nature ecology & evolution
Published: April 12, 2019
Last Updated: 09/26/2026