Matteo E. Bonfanti

Max Von Laue Str. 7
Frankfurt Am Main, HE 60438, Germany

Last Updated: 09/26/2026

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Found 22 publications

nf-core/crisprseq: a versatile pipeline for comprehensive analysis of CRISPR gene editing and screening assays.

nf-core/crisprseq: a versatile pipeline for comprehensive analysis of CRISPR gene editing and screening assays.

Journal: NAR genomics and bioinformatics
Published: June 10, 2025

Engineering Toxoplasma gondii secretion systems for intracellular delivery of multiple large therapeutic proteins to neurons.

Engineering Toxoplasma gondii secretion systems for intracellular delivery of multiple large therapeutic proteins to neurons.

Journal: Nature microbiology
Published: December 02, 2023

Multiplexing cortical brain organoids for the longitudinal dissection of developmental traits at single-cell resolution.

Multiplexing cortical brain organoids for the longitudinal dissection of developmental traits at single-cell resolution.

Journal: Nature methods
Published: August 18, 2023

RAGE engagement by SARS-CoV-2 enables monocyte infection and underlies COVID-19 severity.

RAGE engagement by SARS-CoV-2 enables monocyte infection and underlies COVID-19 severity.

Journal: Cell reports. Medicine
Published: July 08, 2022

Automatized protocol and interface to simulate QM/MM time-resolved transient absorption at TD-DFT level with COBRAMM.

Automatized protocol and interface to simulate QM/MM time-resolved transient absorption at TD-DFT level with COBRAMM.

Journal: Journal of computational chemistry
Published: May 02, 2022

QM/MM Nonadiabatic Dynamics: the SHARC/COBRAMM Approach.

QM/MM Nonadiabatic Dynamics: the SHARC/COBRAMM Approach.

Journal: Journal of chemical theory and computation
Published: June 11, 2021

Spectral Tuning and Photoisomerization Efficiency in Push-Pull Azobenzenes: Designing Principles.

Spectral Tuning and Photoisomerization Efficiency in Push-Pull Azobenzenes: Designing Principles.

Journal: The journal of physical chemistry. A
Published: November 10, 2020

Tailoring Spectral and Photochemical Properties of Bioinspired Retinal Mimics by in Silico Engineering.

Tailoring Spectral and Photochemical Properties of Bioinspired Retinal Mimics by in Silico Engineering.

Journal: Angewandte Chemie (International ed. in English)
Published: July 01, 2020

First-principles description of intra-chain exciton migration in an oligo(para-phenylene vinylene) chain. I. Generalized Frenkel-Holstein Hamiltonian.

First-principles description of intra-chain exciton migration in an oligo(para-phenylene vinylene) chain. I. Generalized Frenkel-Holstein Hamiltonian.

Journal: The Journal of chemical physics
Published: June 04, 2020

To bend or not to bend, the dilemma of multiple bonds.

To bend or not to bend, the dilemma of multiple bonds.

Journal: Physical chemistry chemical physics : PCCP
Published: November 30, 2019

Multi-configurational Ehrenfest simulations of ultrafast nonadiabatic dynamics in a charge-transfer complex.

Multi-configurational Ehrenfest simulations of ultrafast nonadiabatic dynamics in a charge-transfer complex.

Journal: The Journal of chemical physics
Published: January 03, 2019

Computation of the S1 ← S0 Vibronic Absorption Spectrum of Formaldehyde by Variational Gaussian Wavepacket and Semiclassical IVR Methods.

Computation of the S1 ← S0 Vibronic Absorption Spectrum of Formaldehyde by Variational Gaussian Wavepacket and Semiclassical IVR Methods.

Journal: Journal of chemical theory and computation
Published: August 25, 2018
Showing 1-12 of 22

Last Updated: 09/26/2026