Mikhail Shugay

16/10 Miklukho Maklaya St
Moscow, MOW 117997, Russian Federation

Last Updated: 09/26/2026

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Found 72 publications

Towards high-quality large-scale T cell receptor antigen specificity data: challenges and promises.

Towards high-quality large-scale T cell receptor antigen specificity data: challenges and promises.

Journal: Nature methods

Published: September 04, 2026

Neighborhood enrichment for the identification of antigen-specific T-cell receptors.

Neighborhood enrichment for the identification of antigen-specific T-cell receptors.

Journal: Briefings in bioinformatics

Published: May 16, 2025

Comprehensive analysis of αβT-cell receptor repertoires reveals signatures of thymic selection.

Comprehensive analysis of αβT-cell receptor repertoires reveals signatures of thymic selection.

Journal: Frontiers in immunology

Published: April 02, 2025

Inference of SARS-CoV-2 exposure biomarkers using large-scale T-cell repertoire profiling.

Inference of SARS-CoV-2 exposure biomarkers using large-scale T-cell repertoire profiling.

Journal: Genome medicine

Published: March 31, 2025

Capturing and Tracking Clonal T-cell Response to Cancer Neoantigens.

Capturing and Tracking Clonal T-cell Response to Cancer Neoantigens.

Journal: Cancer immunology research

Published: November 29, 2024

TCREMP: A Bioinformatic Pipeline for Efficient Embedding of T-cell Receptor Sequences from Immune Repertoire and Single-cell Sequencing Data.

TCREMP: A Bioinformatic Pipeline for Efficient Embedding of T-cell Receptor Sequences from Immune Repertoire and Single-cell Sequencing Data.

Journal: Journal of molecular biology

Published: November 29, 2024

Convergence, plasticity, and tissue residence of regulatory T cell response via TCR repertoire prism.

Convergence, plasticity, and tissue residence of regulatory T cell response via TCR repertoire prism.

Journal: eLife

Published: April 09, 2024

Detecting T-cell clonal expansions and quantifying clone survival using deep profiling of immune repertoires.

Detecting T-cell clonal expansions and quantifying clone survival using deep profiling of immune repertoires.

Journal: Frontiers in immunology

Published: October 14, 2023

Structure-based prediction of T cell receptor recognition of unseen epitopes using TCRen.

Structure-based prediction of T cell receptor recognition of unseen epitopes using TCRen.

Journal: Nature computational science

Published: July 16, 2023

Large-scale template-based structural modeling of T-cell receptors with known antigen specificity reveals complementarity features.

Large-scale template-based structural modeling of T-cell receptors with known antigen specificity reveals complementarity features.

Journal: Frontiers in immunology

Published: May 18, 2023

HLA variants have different preferences to present proteins with specific molecular functions which are complemented in frequent haplotypes.

HLA variants have different preferences to present proteins with specific molecular functions which are complemented in frequent haplotypes.

Journal: Frontiers in immunology

Published: October 11, 2022

VDJdb in the pandemic era: a compendium of T cell receptors specific for SARS-CoV-2.

VDJdb in the pandemic era: a compendium of T cell receptors specific for SARS-CoV-2.

Journal: Nature methods

Published: August 15, 2022

Showing 1-12 of 72

Last Updated: 09/26/2026