Ruth Isserlin

160 College Street, M5S 3E1
Toronto, ON, Canada

Last Updated: 09/26/2026

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Found 35 publications

Tutorial: annotation of animal genomes.

Tutorial: annotation of animal genomes.

Journal: Nature protocols

Published: March 07, 2025

Gene-set enrichment analysis and visualization on the web using EnrichmentMap:RNASeq.

Gene-set enrichment analysis and visualization on the web using EnrichmentMap:RNASeq.

Journal: Bioinformatics advances

Published: February 28, 2025

netDx: Software for building interpretable patient classifiers by multi-'omic data integration using patient similarity networks.

netDx: Software for building interpretable patient classifiers by multi-'omic data integration using patient similarity networks.

Journal: F1000Research

Published: January 04, 2021

Control of tissue development and cell diversity by cell cycle-dependent transcriptional filtering.

Control of tissue development and cell diversity by cell cycle-dependent transcriptional filtering.

Journal: eLife

Published: November 17, 2020

Distinct DNA methylation patterns associated with treatment resistance in metastatic castration resistant prostate cancer.

Distinct DNA methylation patterns associated with treatment resistance in metastatic castration resistant prostate cancer.

Journal: Scientific reports

Published: October 20, 2020

Dynamics of the cell-free DNA methylome of metastatic prostate cancer during androgen-targeting treatment.

Dynamics of the cell-free DNA methylome of metastatic prostate cancer during androgen-targeting treatment.

Journal: Epigenomics

Published: September 02, 2020

RCy3: Network biology using Cytoscape from within R.

RCy3: Network biology using Cytoscape from within R.

Journal: F1000Research

Published: December 02, 2019

netDx: interpretable patient classification using integrated patient similarity networks.

netDx: interpretable patient classification using integrated patient similarity networks.

Journal: Molecular systems biology

Published: March 16, 2019

Pathway enrichment analysis and visualization of omics data using g:Profiler, GSEA, Cytoscape and EnrichmentMap.

Pathway enrichment analysis and visualization of omics data using g:Profiler, GSEA, Cytoscape and EnrichmentMap.

Journal: Nature protocols

Published: January 22, 2019

Exploring targets of TET2-mediated methylation reprogramming as potential discriminators of prostate cancer progression.

Exploring targets of TET2-mediated methylation reprogramming as potential discriminators of prostate cancer progression.

Journal: Clinical epigenetics

Published: December 18, 2018

Single-cell transcriptomic profiling of the aging mouse brain.

Single-cell transcriptomic profiling of the aging mouse brain.

Journal: Nature neuroscience

Published: October 10, 2018

Bmi1 regulates human glioblastoma stem cells through activation of differential gene networks in CD133+ brain tumor initiating cells.

Bmi1 regulates human glioblastoma stem cells through activation of differential gene networks in CD133+ brain tumor initiating cells.

Journal: Journal of neuro-oncology

Published: October 09, 2018

Showing 1-12 of 35

Last Updated: 09/26/2026