Samuel T. Horsfield

Hinxton, ENG, United Kingdom

Last Updated: 09/26/2026

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Found 13 publications

AllTheBacteria: a community resource empowers biology and discovers novel peptide antibiotics.

AllTheBacteria: a community resource empowers biology and discovers novel peptide antibiotics.

Journal: bioRxiv : the preprint server for biology
Published: July 17, 2026

A reusable model of pangenome selection informs optimal surveillance strategies over vaccine introductions.

A reusable model of pangenome selection informs optimal surveillance strategies over vaccine introductions.

Journal: Genome medicine
Published: December 18, 2025

Unlocking CRISPR-Cas9 editing for widely diverse Dictyostelid species.

Unlocking CRISPR-Cas9 editing for widely diverse Dictyostelid species.

Journal: Molecular systems biology
Published: May 03, 2025

Integrated population clustering and genomic epidemiology with PopPIPE.

Integrated population clustering and genomic epidemiology with PopPIPE.

Journal: Microbial genomics
Published: April 28, 2025

Pore-C sequencing identifies episome-driven chromosome conformation perturbations differentiating pneumococcal epigenetic variants.

Pore-C sequencing identifies episome-driven chromosome conformation perturbations differentiating pneumococcal epigenetic variants.

Journal: PLoS pathogens
Published: March 23, 2025

Determining genotype and antimicrobial resistance of Salmonella Typhi in environmental samples by amplicon sequencing.

Determining genotype and antimicrobial resistance of Salmonella Typhi in environmental samples by amplicon sequencing.

Journal: PLoS neglected tropical diseases
Published: August 09, 2024

CELEBRIMBOR: core and accessory genes from metagenomes.

CELEBRIMBOR: core and accessory genes from metagenomes.

Journal: Bioinformatics (Oxford, England)
Published: April 22, 2024

Optimizing nanopore adaptive sampling for pneumococcal serotype surveillance in complex samples using the graph-based GNASTy algorithm.

Optimizing nanopore adaptive sampling for pneumococcal serotype surveillance in complex samples using the graph-based GNASTy algorithm.

Journal: Genome research
Published: April 12, 2024

Pangenome-spanning epistasis and coselection analysis via de Bruijn graphs.

Pangenome-spanning epistasis and coselection analysis via de Bruijn graphs.

Journal: Genome research
Published: September 07, 2023

Accurate and fast graph-based pangenome annotation and clustering with ggCaller.

Accurate and fast graph-based pangenome annotation and clustering with ggCaller.

Journal: Genome research
Published: January 24, 2023

Nanopore adaptive sampling: a tool for enrichment of low abundance species in metagenomic samples.

Nanopore adaptive sampling: a tool for enrichment of low abundance species in metagenomic samples.

Journal: Genome biology
Published: May 08, 2021

Improved Prediction of Bacterial Genotype-Phenotype Associations Using Interpretable Pangenome-Spanning Regressions.

Improved Prediction of Bacterial Genotype-Phenotype Associations Using Interpretable Pangenome-Spanning Regressions.

Journal: mBio
Published: July 09, 2020
Showing 1-12 of 13

Last Updated: 09/26/2026