Sandra Reuter

Freiburg, BW, Germany

Last Updated: 09/26/2026

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Found 68 publications

Prediction of genetic relatedness of Escherichia coli using neighbor typing: a tool for rapid outbreak detection.

Prediction of genetic relatedness of Escherichia coli using neighbor typing: a tool for rapid outbreak detection.

Journal: Antimicrobial agents and chemotherapy

Published: January 26, 2026

Mitigation and detection of putative microbial contaminant reads from long-read metagenomic datasets.

Mitigation and detection of putative microbial contaminant reads from long-read metagenomic datasets.

Journal: Microbial genomics

Published: January 22, 2026

The burden of hospital-acquired legionellosis in German teaching hospitals.

The burden of hospital-acquired legionellosis in German teaching hospitals.

Journal: Infection

Published: January 18, 2026

Prospective Whole-Genome Sequencing to Identify Bacterial Transmission and Its Modifiers in Neonates.

Prospective Whole-Genome Sequencing to Identify Bacterial Transmission and Its Modifiers in Neonates.

Journal: JAMA network open

Published: November 21, 2025

BaGPipe: an automated, reproducible, and flexible pipeline for bacterial genome-wide association studies.

BaGPipe: an automated, reproducible, and flexible pipeline for bacterial genome-wide association studies.

Journal: BMC microbiology

Published: October 09, 2025

Carbapenem resistant Klebsiella pneumoniae isolates at a tertiary hospital in Cape Town, South Africa, are dominated by specific local clones rather than previously described international lineages.

Carbapenem resistant Klebsiella pneumoniae isolates at a tertiary hospital in Cape Town, South Africa, are dominated by specific local clones rather than previously described international lineages.

Journal: PLoS pathogens

Published: August 14, 2025

Use of integrated genomic surveillance by local public health authorities: Recommendations based on a mixed-methods study of current adoption, applications and success factors, Germany, 2023.

Use of integrated genomic surveillance by local public health authorities: Recommendations based on a mixed-methods study of current adoption, applications and success factors, Germany, 2023.

Journal: Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin

Published: April 04, 2025

Dissemination of a IncHI2A plasmid co-harboring the mcr-9 and blaNDM-1 genes in Israeli hospitals.

Dissemination of a IncHI2A plasmid co-harboring the mcr-9 and blaNDM-1 genes in Israeli hospitals.

Journal: Annals of clinical microbiology and antimicrobials

Published: February 17, 2025

Double carbapenemases in Klebsiella pneumoniae blood isolates: dissemination in a single medical center via multiple plasmids and a variety of highly efficient clones.

Double carbapenemases in Klebsiella pneumoniae blood isolates: dissemination in a single medical center via multiple plasmids and a variety of highly efficient clones.

Journal: Antimicrobial agents and chemotherapy

Published: February 03, 2025

Tracking clonal and plasmid transmission in colistin- and carbapenem-resistant Klebsiella pneumoniae.

Tracking clonal and plasmid transmission in colistin- and carbapenem-resistant Klebsiella pneumoniae.

Journal: mSystems

Published: January 10, 2025

Rapid inference of antibiotic susceptibility phenotype of uropathogens using metagenomic sequencing with neighbor typing.

Rapid inference of antibiotic susceptibility phenotype of uropathogens using metagenomic sequencing with neighbor typing.

Journal: Microbiology spectrum

Published: November 29, 2024

Estimation of SARS-CoV-2 fitness gains from genomic surveillance data without prior lineage classification.

Estimation of SARS-CoV-2 fitness gains from genomic surveillance data without prior lineage classification.

Journal: Proceedings of the National Academy of Sciences of the United States of America

Published: June 11, 2024

Showing 1-12 of 68

Last Updated: 09/26/2026