Shahar Alon

Ramat Gan, TA 52900, Israel

Last Updated: 09/26/2026

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Found 35 publications

ModelistsGCN: a multimodal graph convolutional network framework for single-cell spatial transcriptomic cell typing.

ModelistsGCN: a multimodal graph convolutional network framework for single-cell spatial transcriptomic cell typing.

Journal: Briefings in bioinformatics

Published: March 03, 2026

InSituPREP enables 3D single-cell mapping of interaction-associated gene programs in the breast cancer tumor microenvironment.

InSituPREP enables 3D single-cell mapping of interaction-associated gene programs in the breast cancer tumor microenvironment.

Journal: Nucleic acids research

Published: November 23, 2025

Super-Resolved Spatial Transcriptomics Reveals Early Changes in RNA Localization in the 5xFAD Hippocampus.

Super-Resolved Spatial Transcriptomics Reveals Early Changes in RNA Localization in the 5xFAD Hippocampus.

Journal: bioRxiv : the preprint server for biology

Published: October 03, 2025

Author Correction: A multi-modal single-cell and spatial expression map of metastatic breast cancer biopsies across clinicopathological features.

Author Correction: A multi-modal single-cell and spatial expression map of metastatic breast cancer biopsies across clinicopathological features.

Journal: Nature medicine

Published: March 29, 2025

A multi-modal single-cell and spatial expression map of metastatic breast cancer biopsies across clinicopathological features.

A multi-modal single-cell and spatial expression map of metastatic breast cancer biopsies across clinicopathological features.

Journal: Nature medicine

Published: November 13, 2023

MolOptimizer: A Molecular Optimization Toolkit for Fragment-Based Drug Design.

MolOptimizer: A Molecular Optimization Toolkit for Fragment-Based Drug Design.

Journal: Molecules (Basel, Switzerland)

Published: November 06, 2023

Computational analysis of super-resolved in situ sequencing data reveals genes modified by immune-tumor contact events.

Computational analysis of super-resolved in situ sequencing data reveals genes modified by immune-tumor contact events.

Journal: RNA (New York, N.Y.)

Published: August 14, 2023

Behavioral Neuroscience in the Era of Genomics: Tools and Lessons for Analyzing High-Dimensional Datasets.

Behavioral Neuroscience in the Era of Genomics: Tools and Lessons for Analyzing High-Dimensional Datasets.

Journal: International journal of molecular sciences

Published: February 10, 2022

Urbanization comprehensively impairs biological rhythms in coral holobionts.

Urbanization comprehensively impairs biological rhythms in coral holobionts.

Journal: Global change biology

Published: September 20, 2021

Barcoded oligonucleotides ligated on RNA amplified for multiplexed and parallel in situ analyses.

Barcoded oligonucleotides ligated on RNA amplified for multiplexed and parallel in situ analyses.

Journal: Nucleic acids research

Published: August 06, 2020

Resource: A multi-species multi-timepoint transcriptome database and webpage for the pineal gland and retina.

Resource: A multi-species multi-timepoint transcriptome database and webpage for the pineal gland and retina.

Journal: Journal of pineal research

Published: April 09, 2020

Corrigendum to: A new cis-acting regulatory element driving gene expression in the zebrafish pineal gland.

Corrigendum to: A new cis-acting regulatory element driving gene expression in the zebrafish pineal gland.

Journal: Bioinformatics (Oxford, England)

Published: May 19, 2019

Showing 1-12 of 35

Last Updated: 09/26/2026