Shuilin L. Jin

No. 92 West Dazhi Street
Harbin, 150001, China

Last Updated: 09/26/2026

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Found 58 publications

STGAT: spatial domain identification of consecutive slices based on graph contrastive learning.

STGAT: spatial domain identification of consecutive slices based on graph contrastive learning.

Journal: Briefings in bioinformatics

Published: February 04, 2026

Accurate and efficient HiChIP interaction detection by modeling restriction enzyme cut site density as biological signal.

Accurate and efficient HiChIP interaction detection by modeling restriction enzyme cut site density as biological signal.

Journal: Briefings in bioinformatics

Published: December 06, 2025

ComicGTN infers disease-associated rare cell states from single-cell multiomic data using DNA sequence-augmented graph transformer networks.

ComicGTN infers disease-associated rare cell states from single-cell multiomic data using DNA sequence-augmented graph transformer networks.

Journal: Genome research

Published: November 11, 2025

HyperDiffuseNet: A Deep Hyperbolic Manifold Learning Method for Dimensionality Reduction in Spatial Transcriptomics.

HyperDiffuseNet: A Deep Hyperbolic Manifold Learning Method for Dimensionality Reduction in Spatial Transcriptomics.

Journal: Journal of computational biology : a journal of computational molecular cell biology

Published: September 22, 2025

Robust integration of single-cell datasets with imbalanced modality composition.

Robust integration of single-cell datasets with imbalanced modality composition.

Journal: Nature communications

Published: September 18, 2025

Reference-Guided Chromosome-by-Chromosome de novo Assembly at Scale Using Low-Coverage High-Fidelity Long-Reads with HiFiCCL.

Reference-Guided Chromosome-by-Chromosome de novo Assembly at Scale Using Low-Coverage High-Fidelity Long-Reads with HiFiCCL.

Journal: Advanced science (Weinheim, Baden-Wurttemberg, Germany)

Published: August 10, 2025

scBCN: deep learning-based batch correction network for integration of heterogeneous single-cell data.

scBCN: deep learning-based batch correction network for integration of heterogeneous single-cell data.

Journal: Briefings in bioinformatics

Published: May 13, 2025

PACells identifies phenotype-associated cell states from single-cell chromatin accessibility profiles.

PACells identifies phenotype-associated cell states from single-cell chromatin accessibility profiles.

Journal: American journal of human genetics

Published: May 05, 2025

Integrating single-cell data with biological variables.

Integrating single-cell data with biological variables.

Journal: Proceedings of the National Academy of Sciences of the United States of America

Published: April 28, 2025

Spatial domain identification method based on multi-view graph convolutional network and contrastive learning.

Spatial domain identification method based on multi-view graph convolutional network and contrastive learning.

Journal: PLoS computational biology

Published: March 02, 2025

stGRL: spatial domain identification, denoising, and imputation algorithm for spatial transcriptome data based on multi-task graph contrastive representation learning.

stGRL: spatial domain identification, denoising, and imputation algorithm for spatial transcriptome data based on multi-task graph contrastive representation learning.

Journal: BMC biology

Published: January 16, 2025

reDA: differential abundance testing on scATAC-seq data using random walk with restart.

reDA: differential abundance testing on scATAC-seq data using random walk with restart.

Journal: Bioinformatics (Oxford, England)

Published: December 18, 2024

Showing 1-12 of 58

Last Updated: 09/26/2026