Sofie Gielis

Antwerpen, VLG, Belgium

Last Updated: 09/26/2026

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Found 12 publications

Machine Learning for TCR Repertoire Epitope Annotation and Pattern Discovery.

Machine Learning for TCR Repertoire Epitope Annotation and Pattern Discovery.

Journal: Immunological reviews

Published: April 29, 2026

Identification of TCR repertoire patterns linked with anti-cancer immunotherapy.

Identification of TCR repertoire patterns linked with anti-cancer immunotherapy.

Journal: Methods in cell biology

Published: March 28, 2024

Training of epitope-TCR prediction models with healthy donor-derived cancer-specific T cells.

Training of epitope-TCR prediction models with healthy donor-derived cancer-specific T cells.

Journal: Methods in cell biology

Published: March 28, 2024

Analysis of Wilms' tumor protein 1 specific TCR repertoire in AML patients uncovers higher diversity in patients in remission than in relapsed.

Analysis of Wilms' tumor protein 1 specific TCR repertoire in AML patients uncovers higher diversity in patients in remission than in relapsed.

Journal: Annals of hematology

Published: March 14, 2024

Simulation of adaptive immune receptors and repertoires with complex immune information to guide the development and benchmarking of AIRR machine learning.

Simulation of adaptive immune receptors and repertoires with complex immune information to guide the development and benchmarking of AIRR machine learning.

Journal: Nucleic acids research

Published: November 04, 2023

Clustering and Annotation of T Cell Receptor Repertoires.

Clustering and Annotation of T Cell Receptor Repertoires.

Journal: Methods in molecular biology (Clifton, N.J.)

Published: May 31, 2023

Lack of functional TCR-epitope interaction is associated with herpes zoster through reduced downstream T cell activation.

Lack of functional TCR-epitope interaction is associated with herpes zoster through reduced downstream T cell activation.

Journal: Cell reports

Published: February 17, 2023

HLA-DRB1 Alleles Associated with Lower Leishmaniasis Susceptibility Share Common Amino Acid Polymorphisms and Epitope Binding Repertoires.

HLA-DRB1 Alleles Associated with Lower Leishmaniasis Susceptibility Share Common Amino Acid Polymorphisms and Epitope Binding Repertoires.

Journal: Vaccines

Published: February 19, 2021

Current challenges for unseen-epitope TCR interaction prediction and a new perspective derived from image classification.

Current challenges for unseen-epitope TCR interaction prediction and a new perspective derived from image classification.

Journal: Briefings in bioinformatics

Published: December 21, 2020

Identification of Epitope-Specific T Cells in T-Cell Receptor Repertoires.

Identification of Epitope-Specific T Cells in T-Cell Receptor Repertoires.

Journal: Methods in molecular biology (Clifton, N.J.)

Published: March 04, 2020

Detection of Enriched T Cell Epitope Specificity in Full T Cell Receptor Sequence Repertoires.

Detection of Enriched T Cell Epitope Specificity in Full T Cell Receptor Sequence Repertoires.

Journal: Frontiers in immunology

Published: August 02, 2019

On the viability of unsupervised T-cell receptor sequence clustering for epitope preference.

On the viability of unsupervised T-cell receptor sequence clustering for epitope preference.

Journal: Bioinformatics (Oxford, England)

Published: June 12, 2018

Showing 1-12 of 12

Last Updated: 09/26/2026