Sowmya R. Krishnan

Chennai, TN 600036, India

Last Updated: 09/26/2026

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Found 23 publications

Blind prediction of complex water and ion ensembles around RNA in CASP16.

Blind prediction of complex water and ion ensembles around RNA in CASP16.

Journal: bioRxiv : the preprint server for biology

Published: November 24, 2025

Blind Prediction of Complex Water and Ion Ensembles Around RNA in CASP16.

Blind Prediction of Complex Water and Ion Ensembles Around RNA in CASP16.

Journal: Proteins

Published: September 08, 2025

A structure-oriented kinetics dataset of enzyme-substrate interactions.

A structure-oriented kinetics dataset of enzyme-substrate interactions.

Journal: Scientific data

Published: May 21, 2025

Structural and Functional Studies on HIV Protease: Mechanism of Action, Subtypes, Inhibitors, and Drug Resistance.

Structural and Functional Studies on HIV Protease: Mechanism of Action, Subtypes, Inhibitors, and Drug Resistance.

Journal: Methods in molecular biology (Clifton, N.J.)

Published: November 22, 2024

DRLiPS: a novel method for prediction of druggable RNA-small molecule binding pockets using machine learning.

DRLiPS: a novel method for prediction of druggable RNA-small molecule binding pockets using machine learning.

Journal: Nucleic acids research

Published: October 02, 2024

Structural Implications of HIV-1 Protease Subtype C Bound to Darunavir: A Molecular Dynamics Study.

Structural Implications of HIV-1 Protease Subtype C Bound to Darunavir: A Molecular Dynamics Study.

Journal: Proteins

Published: September 03, 2024

Suitability of large language models for extraction of high-quality chemical reaction dataset from patent literature.

Suitability of large language models for extraction of high-quality chemical reaction dataset from patent literature.

Journal: Journal of cheminformatics

Published: August 12, 2024

ZFP-CanPred: Predicting the effect of mutations in zinc-finger proteins in cancers using protein language models.

ZFP-CanPred: Predicting the effect of mutations in zinc-finger proteins in cancers using protein language models.

Journal: Methods (San Diego, Calif.)

Published: July 13, 2024

Comment on "Contrastive pre-training and 3D convolution neural network for RNA and small molecule binding affinity prediction" by Sun and Gao.

Comment on "Contrastive pre-training and 3D convolution neural network for RNA and small molecule binding affinity prediction" by Sun and Gao.

Journal: Bioinformatics (Oxford, England)

Published: April 24, 2024

rAbDesFlow: a novel workflow for computational recombinant antibody design for healthcare engineering.

rAbDesFlow: a novel workflow for computational recombinant antibody design for healthcare engineering.

Journal: Antibody therapeutics

Published: February 05, 2024

Mechanism of drug resistance in HIV-1 protease subtype C in the presence of Atazanavir.

Mechanism of drug resistance in HIV-1 protease subtype C in the presence of Atazanavir.

Journal: Current research in structural biology

Published: December 28, 2023

Target-specific novel molecules with their recipe: Incorporating synthesizability in the design process.

Target-specific novel molecules with their recipe: Incorporating synthesizability in the design process.

Journal: Journal of molecular graphics & modelling

Published: December 03, 2023

Showing 1-12 of 23

Last Updated: 09/26/2026