Tim Downing

Dublin, L, Ireland

Last Updated: 09/26/2026

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Found 38 publications

Three thousand five hundred years of sheeppox virus evolution inferred from archaeological and codicological genomes.

Three thousand five hundred years of sheeppox virus evolution inferred from archaeological and codicological genomes.

Journal: Science advances
Published: September 02, 2026

Using pangenome variation graphs to improve mutation detection in a large DNA virus.

Using pangenome variation graphs to improve mutation detection in a large DNA virus.

Journal: Microbial genomics
Published: May 20, 2026

Pathogen-specific immune responses might underlie divergent outcomes of coronavirus and influenza infection in the natural porcine host.

Pathogen-specific immune responses might underlie divergent outcomes of coronavirus and influenza infection in the natural porcine host.

Journal: Communications biology
Published: November 26, 2025

Panalyze: automated virus pangenome variation graph construction, analysis and annotation.

Panalyze: automated virus pangenome variation graph construction, analysis and annotation.

Journal: Bioinformatics advances
Published: August 21, 2025

Competencies for bioinformatics core facility scientists: extension of the ISCB competency framework for bioinformatics.

Competencies for bioinformatics core facility scientists: extension of the ISCB competency framework for bioinformatics.

Journal: Bioinformatics advances
Published: May 17, 2025

Approaches to Studying Viral Pangenome Variation Graphs.

Approaches to Studying Viral Pangenome Variation Graphs.

Journal: Genomics, proteomics & bioinformatics
Published: December 06, 2024

Genetic coping mechanisms observed in Leishmania tropica, from the Middle East region, enhance the survival of the parasite after drug exposure.

Genetic coping mechanisms observed in Leishmania tropica, from the Middle East region, enhance the survival of the parasite after drug exposure.

Journal: PloS one
Published: April 08, 2024

Sequencing and Analysis of Lumpy Skin Disease Virus Whole Genomes Reveals a New Viral Subgroup in West and Central Africa.

Sequencing and Analysis of Lumpy Skin Disease Virus Whole Genomes Reveals a New Viral Subgroup in West and Central Africa.

Journal: Viruses
Published: December 03, 2023

A primer on correlation-based dimension reduction methods for multi-omics analysis.

A primer on correlation-based dimension reduction methods for multi-omics analysis.

Journal: Journal of the Royal Society, Interface
Published: October 11, 2023

Informing plasmid compatibility with bacterial hosts using protein-protein interaction data.

Informing plasmid compatibility with bacterial hosts using protein-protein interaction data.

Journal: Genomics
Published: August 19, 2022

Bacterial plasmid-associated and chromosomal proteins have fundamentally different properties in protein interaction networks.

Bacterial plasmid-associated and chromosomal proteins have fundamentally different properties in protein interaction networks.

Journal: Scientific reports
Published: July 11, 2022

Aberrant calcium signalling downstream of mutations in TP53 and the PI3K/AKT pathway genes promotes disease progression and therapy resistance in triple negative breast cancer.

Aberrant calcium signalling downstream of mutations in TP53 and the PI3K/AKT pathway genes promotes disease progression and therapy resistance in triple negative breast cancer.

Journal: Cancer drug resistance (Alhambra, Calif.)
Published: March 16, 2022
Showing 1-12 of 38

Last Updated: 09/26/2026