Tomoki Nakayoshi

Nagoya, 4648601, Japan

Last Updated: 09/26/2026

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Found 41 publications

Effect of Cytochrome P450 3A4 Genetic Polymorphisms on Heme Recognition by Using Molecular Dynamics Simulations.

Effect of Cytochrome P450 3A4 Genetic Polymorphisms on Heme Recognition by Using Molecular Dynamics Simulations.

Journal: Biological & pharmaceutical bulletin

Published: March 29, 2026

Differences in reactive metabolite formation and cytochrome P450 binding between acetaminophen and its bicyclo[1.1.1]pentane bioisostere.

Differences in reactive metabolite formation and cytochrome P450 binding between acetaminophen and its bicyclo[1.1.1]pentane bioisostere.

Journal: Drug metabolism and pharmacokinetics

Published: January 15, 2026

Comprehensive functional characterization of rare and known CYP2E1 allelic variants identified in a Japanese population.

Comprehensive functional characterization of rare and known CYP2E1 allelic variants identified in a Japanese population.

Journal: Biochemical pharmacology

Published: June 24, 2025

Investigation of the Effect of C-Terminal Adjacent Phenylalanine Residues on Asparagine Deamidation by Quantum Chemical Calculations.

Investigation of the Effect of C-Terminal Adjacent Phenylalanine Residues on Asparagine Deamidation by Quantum Chemical Calculations.

Journal: International journal of molecular sciences

Published: June 03, 2025

Molecular Dynamics Simulations of Monomeric and Tetrameric Amyloid β1-42 Peptides with d-Aspartic Acid Residues.

Molecular Dynamics Simulations of Monomeric and Tetrameric Amyloid β1-42 Peptides with d-Aspartic Acid Residues.

Journal: Chembiochem : a European journal of chemical biology

Published: February 26, 2025

Quantum Chemical Calculations of the Nonenzymatic Bicarbonate Ion-Catalyzed Lactamization of Ornithine Residues to Identify the Components of Primitive Proteins.

Quantum Chemical Calculations of the Nonenzymatic Bicarbonate Ion-Catalyzed Lactamization of Ornithine Residues to Identify the Components of Primitive Proteins.

Journal: The journal of physical chemistry. A

Published: February 26, 2025

Reduction-Induced Structural and Motional Changes of Plant-Type Ferredoxin Using Molecular Dynamics and Umbrella Sampling Simulations.

Reduction-Induced Structural and Motional Changes of Plant-Type Ferredoxin Using Molecular Dynamics and Umbrella Sampling Simulations.

Journal: Journal of computational chemistry

Published: February 19, 2025

Highly regio- and stereoselective (3 + 2) annulation reaction of allenoates with 3-methyleneindolin-2-ones catalyzed by a planar chiral [2.2]paracyclophane-based bifunctional phosphine-phenol catalyst.

Highly regio- and stereoselective (3 + 2) annulation reaction of allenoates with 3-methyleneindolin-2-ones catalyzed by a planar chiral [2.2]paracyclophane-based bifunctional phosphine-phenol catalyst.

Journal: Organic & biomolecular chemistry

Published: July 15, 2024

Computational Estimation of Residues Involving Resistance to the SARS-CoV-2 Main Protease Inhibitor Ensitrelvir Based on Virtual Alanine Scan of the Active Site.

Computational Estimation of Residues Involving Resistance to the SARS-CoV-2 Main Protease Inhibitor Ensitrelvir Based on Virtual Alanine Scan of the Active Site.

Journal: Biological & pharmaceutical bulletin

Published: May 19, 2024

Theoretical Studies on the Reaction Mechanism of Schiff Base Formation from Hexoses.

Theoretical Studies on the Reaction Mechanism of Schiff Base Formation from Hexoses.

Journal: The journal of physical chemistry. B

Published: May 10, 2024

Functional significance of CYP2B6 gene rare allelic variants identified in Japanese individuals.

Functional significance of CYP2B6 gene rare allelic variants identified in Japanese individuals.

Journal: Biochemical pharmacology

Published: May 06, 2024

Structural Impact Assessment of Cytochrome P450 2A13 Polymorphisms Using Molecular Dynamics Simulations.

Structural Impact Assessment of Cytochrome P450 2A13 Polymorphisms Using Molecular Dynamics Simulations.

Journal: Biological & pharmaceutical bulletin

Published: March 13, 2024

Showing 1-12 of 41

Last Updated: 09/26/2026