Valerie M. Christiaens

Leuven, VLG, Belgium

Last Updated: 09/26/2026

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Found 27 publications

Evaluating single-cell ATAC-seq atlasing technologies using sequence-to-function modeling.

Evaluating single-cell ATAC-seq atlasing technologies using sequence-to-function modeling.

Journal: Nature communications
Published: April 24, 2025

CREsted: modeling genomic and synthetic cell-type-specific enhancers across tissues and species.

CREsted: modeling genomic and synthetic cell-type-specific enhancers across tissues and species.

Journal: Nature methods
Published: April 02, 2025

Enhancer-driven cell type comparison reveals similarities between the mammalian and bird pallium.

Enhancer-driven cell type comparison reveals similarities between the mammalian and bird pallium.

Journal: Science (New York, N.Y.)
Published: February 13, 2025

Single-cell spatial multi-omics and deep learning dissect enhancer-driven gene regulatory networks in liver zonation.

Single-cell spatial multi-omics and deep learning dissect enhancer-driven gene regulatory networks in liver zonation.

Journal: Nature cell biology
Published: November 22, 2022

SCENIC+: single-cell multiomic inference of enhancers and gene regulatory networks.

SCENIC+: single-cell multiomic inference of enhancers and gene regulatory networks.

Journal: Nature methods
Published: August 19, 2022

Cell-type-directed design of synthetic enhancers.

Cell-type-directed design of synthetic enhancers.

Journal: Nature
Published: July 06, 2022

Shared enhancer gene regulatory networks between wound and oncogenic programs.

Shared enhancer gene regulatory networks between wound and oncogenic programs.

Journal: eLife
Published: June 17, 2022

Systematic benchmarking of single-cell ATAC-sequencing protocols.

Systematic benchmarking of single-cell ATAC-sequencing protocols.

Journal: Nature biotechnology
Published: January 18, 2022

Hydrop enables droplet-based single-cell ATAC-seq and single-cell RNA-seq using dissolvable hydrogel beads.

Hydrop enables droplet-based single-cell ATAC-seq and single-cell RNA-seq using dissolvable hydrogel beads.

Journal: eLife
Published: September 16, 2021

Analysis of long and short enhancers in melanoma cell states.

Analysis of long and short enhancers in melanoma cell states.

Journal: eLife
Published: June 28, 2021

Decoding gene regulation in the fly brain.

Decoding gene regulation in the fly brain.

Journal: Nature
Published: December 30, 2020

Interpretation of allele-specific chromatin accessibility using cell state-aware deep learning.

Interpretation of allele-specific chromatin accessibility using cell state-aware deep learning.

Journal: Genome research
Published: January 30, 2020
Showing 1-12 of 27

Last Updated: 09/26/2026