Vanessa Vermeirssen

Gent, VLG 9000, Belgium

Last Updated: 09/26/2026

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Found 20 publications

How negative sampling shapes the performance of transcription factor binding site prediction models.

How negative sampling shapes the performance of transcription factor binding site prediction models.

Journal: Bioinformatics (Oxford, England)

Published: September 29, 2025

A human-specific, concerted repression of microcephaly genes contributes to radiation-induced growth defects in cortical organoids.

A human-specific, concerted repression of microcephaly genes contributes to radiation-induced growth defects in cortical organoids.

Journal: iScience

Published: July 10, 2024

Proteomics dataset of lysolecithin-induced demyelinated lesions in corpus callosum of Lewis rats, treated with Vagus nerve stimulation or sham treatment.

Proteomics dataset of lysolecithin-induced demyelinated lesions in corpus callosum of Lewis rats, treated with Vagus nerve stimulation or sham treatment.

Journal: Data in brief

Published: May 15, 2024

A single-cell multimodal view on gene regulatory network inference from transcriptomics and chromatin accessibility data.

A single-cell multimodal view on gene regulatory network inference from transcriptomics and chromatin accessibility data.

Journal: Briefings in bioinformatics

Published: April 05, 2024

NBAtlas: A harmonized single-cell transcriptomic reference atlas of human neuroblastoma tumors.

NBAtlas: A harmonized single-cell transcriptomic reference atlas of human neuroblastoma tumors.

Journal: Cell reports

Published: February 01, 2024

Vagus nerve stimulation enhances remyelination and decreases innate neuroinflammation in lysolecithin-induced demyelination.

Vagus nerve stimulation enhances remyelination and decreases innate neuroinflammation in lysolecithin-induced demyelination.

Journal: Brain stimulation

Published: January 23, 2024

Evaluation of single-sample network inference methods for precision oncology.

Evaluation of single-sample network inference methods for precision oncology.

Journal: NPJ systems biology and applications

Published: July 11, 2023

Human iPSC modeling recapitulates in vivo sympathoadrenal development and reveals an aberrant developmental subpopulation in familial neuroblastoma.

Human iPSC modeling recapitulates in vivo sympathoadrenal development and reveals an aberrant developmental subpopulation in familial neuroblastoma.

Journal: iScience

Published: December 20, 2022

Opportunities and challenges in interpretable deep learning for drug sensitivity prediction of cancer cells.

Opportunities and challenges in interpretable deep learning for drug sensitivity prediction of cancer cells.

Journal: Frontiers in bioinformatics

Published: September 05, 2022

RRM2 enhances MYCN-driven neuroblastoma formation and acts as a synergistic target with CHK1 inhibition.

RRM2 enhances MYCN-driven neuroblastoma formation and acts as a synergistic target with CHK1 inhibition.

Journal: Science advances

Published: July 20, 2022

HTSplotter: An end-to-end data processing, analysis and visualisation tool for chemical and genetic in vitro perturbation screening.

HTSplotter: An end-to-end data processing, analysis and visualisation tool for chemical and genetic in vitro perturbation screening.

Journal: PloS one

Published: June 20, 2022

SUBATOMIC: a SUbgraph BAsed mulTi-OMIcs clustering framework to analyze integrated multi-edge networks.

SUBATOMIC: a SUbgraph BAsed mulTi-OMIcs clustering framework to analyze integrated multi-edge networks.

Journal: BMC bioinformatics

Published: May 17, 2022

Showing 1-12 of 20

Last Updated: 09/26/2026