Xiaoke Ma

No. 2 South Taibai Road
Xi'an, 710071, China

Last Updated: 09/26/2026

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Found 57 publications

Structural-information guided fusion for spatial domain identification from spatial transcriptomics.

Structural-information guided fusion for spatial domain identification from spatial transcriptomics.

Journal: Bioinformatics (Oxford, England)

Published: May 16, 2026

SA2E: spatial-aware auto-encoder for cell type deconvolution of spatial transcriptomics data.

SA2E: spatial-aware auto-encoder for cell type deconvolution of spatial transcriptomics data.

Journal: Bioinformatics (Oxford, England)

Published: December 25, 2025

MPT-MIL: Multimodal Aware Prompt Tuning for Prediction of Cancer Survival.

MPT-MIL: Multimodal Aware Prompt Tuning for Prediction of Cancer Survival.

Journal: IEEE journal of biomedical and health informatics

Published: December 04, 2025

Signal-based spatial domain identification of spatially resolved transcriptomics with multigraph fusion.

Signal-based spatial domain identification of spatially resolved transcriptomics with multigraph fusion.

Journal: Briefings in bioinformatics

Published: September 22, 2025

Single-cell multiomics identifies Tcf1 and Lef1 as key initiators of early thymic progenitor fate.

Single-cell multiomics identifies Tcf1 and Lef1 as key initiators of early thymic progenitor fate.

Journal: Science immunology

Published: September 12, 2025

Network model for alignment, stitching and slice-to-volume 3D reconstruction of large-scale spatially resolved slices.

Network model for alignment, stitching and slice-to-volume 3D reconstruction of large-scale spatially resolved slices.

Journal: Nature communications

Published: August 19, 2025

Network models for bridging denoising and identifying spatial domains of spatially resolved transcriptomics.

Network models for bridging denoising and identifying spatial domains of spatially resolved transcriptomics.

Journal: PLoS computational biology

Published: June 23, 2025

Alignment of spatial transcriptomics slices across diseases, platforms and conditions.

Alignment of spatial transcriptomics slices across diseases, platforms and conditions.

Journal: Genome medicine

Published: May 23, 2025

Denoising spatially resolved transcriptomics with consistency of heterogeneous spatial coordinates, transcription, and morphology.

Denoising spatially resolved transcriptomics with consistency of heterogeneous spatial coordinates, transcription, and morphology.

Journal: Briefings in bioinformatics

Published: April 16, 2025

Enhancing and accelerating cell type deconvolution of large-scale spatial transcriptomics slices with dual network model.

Enhancing and accelerating cell type deconvolution of large-scale spatial transcriptomics slices with dual network model.

Journal: Bioinformatics (Oxford, England)

Published: March 15, 2025

MuCST: restoring and integrating heterogeneous morphology images and spatial transcriptomics data with contrastive learning.

MuCST: restoring and integrating heterogeneous morphology images and spatial transcriptomics data with contrastive learning.

Journal: Genome medicine

Published: November 17, 2024

Identification of Causal Plasma Proteins in Hepatocellular Carcinoma via Two-Sample Mendelian Randomization and Integrative Transcriptomic‒Proteomic Analysis.

Identification of Causal Plasma Proteins in Hepatocellular Carcinoma via Two-Sample Mendelian Randomization and Integrative Transcriptomic‒Proteomic Analysis.

Journal: Cancer research communications

Published: October 30, 2024

Showing 1-12 of 57

Last Updated: 09/26/2026