Zhi-ping D. Liu

No.17923 Jingshi Road
Jinan, 250061, China

Last Updated: 09/26/2026

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Found 84 publications

R4ST: a reference-guided graph-generative model for robust reconstruction of spatial transcriptomic profiles.

R4ST: a reference-guided graph-generative model for robust reconstruction of spatial transcriptomic profiles.

Journal: Bioinformatics (Oxford, England)

Published: July 07, 2026

AttentionCCA: An attention-based canonical correlation analysis framework for integrative multi-omics cancer stratification.

AttentionCCA: An attention-based canonical correlation analysis framework for integrative multi-omics cancer stratification.

Journal: Computer methods and programs in biomedicine

Published: January 29, 2026

A protein surface-aware multimodal framework for residue-level metal-binding site recognition.

A protein surface-aware multimodal framework for residue-level metal-binding site recognition.

Journal: Cell reports methods

Published: January 05, 2026

CNet-Cox for interpretable network biomarker discovery and survival risk scoring in precise breast cancer prognosis.

CNet-Cox for interpretable network biomarker discovery and survival risk scoring in precise breast cancer prognosis.

Journal: NPJ digital medicine

Published: November 29, 2025

MOFNet: a deep learning framework for multi-omics data fusion in cancer subtype classification.

MOFNet: a deep learning framework for multi-omics data fusion in cancer subtype classification.

Journal: Molecular omics

Published: October 01, 2025

Inferring Gene Regulatory Networks From Single-Cell RNA Sequencing Data by Dual-Role Graph Contrastive Learning.

Inferring Gene Regulatory Networks From Single-Cell RNA Sequencing Data by Dual-Role Graph Contrastive Learning.

Journal: Advanced science (Weinheim, Baden-Wurttemberg, Germany)

Published: September 17, 2025

LogicSR: prior-guided symbolic regression for gene regulatory network inference from single-cell transcriptomics data.

LogicSR: prior-guided symbolic regression for gene regulatory network inference from single-cell transcriptomics data.

Journal: Briefings in bioinformatics

Published: August 30, 2025

TransMarker: Unveiling dynamic network biomarkers in cancer progression through cross-state graph alignment and optimal transport.

TransMarker: Unveiling dynamic network biomarkers in cancer progression through cross-state graph alignment and optimal transport.

Journal: PLoS computational biology

Published: August 16, 2025

MTPrior: A Multi-Task Hierarchical Graph Embedding Framework for Prioritizing Hepatocellular Carcinoma-Associated Genes and Long Noncoding RNAs.

MTPrior: A Multi-Task Hierarchical Graph Embedding Framework for Prioritizing Hepatocellular Carcinoma-Associated Genes and Long Noncoding RNAs.

Journal: IEEE journal of biomedical and health informatics

Published: June 30, 2025

RegNetwork 2025: an integrative data repository for gene regulatory networks in human and mouse.

RegNetwork 2025: an integrative data repository for gene regulatory networks in human and mouse.

Journal: Nucleic acids research

Published: June 02, 2025

Inferring cell-type-specific gene regulatory network from cellular transcriptomics data with GeneLink.

Inferring cell-type-specific gene regulatory network from cellular transcriptomics data with GeneLink.

Journal: Briefings in bioinformatics

Published: April 21, 2025

Structure-Based Prediction of lncRNA-Protein Interactions by Deep Learning.

Structure-Based Prediction of lncRNA-Protein Interactions by Deep Learning.

Journal: Methods in molecular biology (Clifton, N.J.)

Published: December 20, 2024

Showing 1-12 of 84

Last Updated: 09/26/2026